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author | CoprDistGit <infra@openeuler.org> | 2023-05-05 11:56:59 +0000 |
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committer | CoprDistGit <infra@openeuler.org> | 2023-05-05 11:56:59 +0000 |
commit | 124f574b75702c34afb70a53d8c821460fb2fcc4 (patch) | |
tree | 05be05eb06d07d38c2985e97a504dbd653e88222 | |
parent | bdf90ffa5b6d373c84482bcd89cb8d3c8a011558 (diff) |
automatic import of python-sxsopeneuler20.03
-rw-r--r-- | .gitignore | 1 | ||||
-rw-r--r-- | python-sxs.spec | 487 | ||||
-rw-r--r-- | sources | 1 |
3 files changed, 489 insertions, 0 deletions
@@ -0,0 +1 @@ +/sxs-2022.4.5.tar.gz diff --git a/python-sxs.spec b/python-sxs.spec new file mode 100644 index 0000000..b470149 --- /dev/null +++ b/python-sxs.spec @@ -0,0 +1,487 @@ +%global _empty_manifest_terminate_build 0 +Name: python-sxs +Version: 2022.4.5 +Release: 1 +Summary: Interface to data produced by the Simulating eXtreme Spacetimes collaboration +License: MIT +URL: https://github.com/sxs-collaboration/sxs +Source0: https://mirrors.nju.edu.cn/pypi/web/packages/f8/12/c501831cdc626b032b01cbf2d97a6bdd3db0b645ed6ef43dca1bd7ce3103/sxs-2022.4.5.tar.gz +BuildArch: noarch + +Requires: python3-numpy +Requires: python3-scipy +Requires: python3-numba +Requires: python3-mkapi +Requires: python3-quaternionic +Requires: python3-spherical +Requires: python3-h5py +Requires: python3-inflection +Requires: python3-requests +Requires: python3-pytest-forked +Requires: python3-tqdm +Requires: python3-pytz +Requires: python3-urllib3 +Requires: python3-pandas +Requires: python3-mkdocs +Requires: python3-black +Requires: python3-pymdown-extensions +Requires: python3-spinsfast +Requires: python3-ipywidgets +Requires: python3-ipykernel +Requires: python3-jupyter_contrib_nbextensions +Requires: python3-jupyterlab +Requires: python3-line_profiler +Requires: python3-memory_profiler +Requires: python3-matplotlib +Requires: python3-sympy +Requires: python3-corner +Requires: python3-qgrid +Requires: python3-rise +Requires: python3-numpy-quaternion +Requires: python3-scri +Requires: python3-pylatexenc +Requires: python3-feedparser +Requires: python3-caltechdata-api + +%description +[](https://github.com/sxs-collaboration/sxs/actions) +[](https://sxs.readthedocs.io/en/main/?badge=main) +[](https://pypi.org/project/sxs/) +[](https://anaconda.org/conda-forge/sxs) +[](https://github.com/sxs-collaboration/sxs/blob/main/LICENSE) +[](https://mybinder.org/v2/gh/moble/sxs_notebooks/master) + + +# Simulating eXtreme Spacetimes python package + +The `sxs` python package provides a high-level interface for using data +produced by the SXS collaboration. In particular, the function `sxs.load` can +automatically find, download, and load data, returning objects that provide +common interfaces to the various types of data, without forcing the user to +worry about details like data formats or where to find the data. It can also +automatically select the newest or highest-resolution dataset for a given +simulation, or return a range of versions or resolutions. Currently, the +high-level objects encapsulate + + * Catalog — a listing of all data produced by the SXS collaboration + * Metadata — data describing the simulation parameters + * Horizons — time-series data describing the apparent horizons + * Waveforms — time-series data describing the extrapolated gravitational-wave + modes + + +## Installation + +Because this package is pure python code, installation is very simple. In +particular, with a reasonably modern installation, you can just run a command +like + +```bash +conda install -c conda-forge sxs +``` + +or + +```bash +python -m pip install sxs +``` + +Here, `conda` requires the [conda](https://docs.anaconda.com/anaconda/install/) +installation of python, which is the most recommended approach for scientific +python; the second command assumes that you have an appropriate python +environment set up in some other way. Either of these commands will download +and install the `sxs` package and its most vital requirements. + +If you want to install all the goodies that enable things like jupyter +notebooks with plots and interactive tables, you could run + +```bash +conda install -c conda-forge sxs-ecosystem +``` + +or + +```bash +python -m pip install sxs[ecosystem] +``` + +You will probably also want to set some sensible defaults to automatically +download and cache data: + +```bash +python -c "import sxs; sxs.write_config(download=True, cache=True)" +``` + +This will write a configuration file in the directory returned by +`sxs.sxs_directory("config")`, and downloaded data will be cached in the +directory returned by `sxs.sxs_directory("cache")`. See [that function's +documentation](https://sxs.readthedocs.io/en/main/api/sxs.utilities.sxs_directories/#sxsutilitiessxs_directoriessxs_directory) +for details. + + +## Usage + +An extensive demonstration of this package's capabilities is available +[here](https://mybinder.org/v2/gh/moble/sxs_notebooks/master), in the form of +interactive jupyter notebooks that are actually running this code and some +pre-downloaded data. The following is just a very brief overview of the `sxs` +package's main components. + +There are four important objects to understand in this package: + +```python +import sxs + +catalog = sxs.load("catalog") +metadata = sxs.load("SXS:BBH:0123/Lev/metadata.json") +horizons = sxs.load("SXS:BBH:0123/Lev/Horizons.h5") +waveform = sxs.load("SXS:BBH:0123/Lev/rhOverM", extrapolation_order=2) +``` + +[The `catalog` +object](https://sxs.readthedocs.io/en/main/api/sxs.catalog.catalog/#sxs.catalog.catalog.Catalog) +contains information about every simulation in the catalog, including all +available data files, and information about how to get them. You probably +don't need to actually know about details like where to get the data, but +`catalog` can help you find the simulations you care about. Most importantly, +`catalog.simulations` is a `dict` object, where the keys are names of +simulations (like "SXS:BBH:0123") and the values are the same types as [the +`metadata` +object](https://sxs.readthedocs.io/en/main/api/sxs.metadata.metadata/#sxs.metadata.metadata.Metadata), +which contains metadata about that simulation — things like mass ratio, spins, +etc. This `metadata` reflects the actual output of the simulations, which +leads to some inconsistencies in their formats. A more consistent interface +(though it is biased toward returning NaNs where a human might glean more +information) is provided by `catalog.table`, which returns a +[`pandas`](https://pandas.pydata.org/docs/) `DataFrame` with specific data +types for each column. + +The actual data itself is primarily contained in the next two objects. [The +`horizons` +object](https://sxs.readthedocs.io/en/main/api/sxs.horizons/#sxs.horizons.Horizons) +has three attributes — `horizons.A`, `horizons.B`, and `horizons.C` — typically +representing the original two horizons of the black-hole binary and the common +horizon that forms at merger. In matter simulations, one or more of these may +be `None`. Otherwise, each of these three is a +[`HorizonQuantities`](https://sxs.readthedocs.io/en/main/api/sxs.horizons/#sxs.horizons.HorizonQuantities) +object, containing several timeseries relating to mass, spin, and position. + +Finally, the +[`waveform`](https://sxs.readthedocs.io/en/main/api/sxs.waveforms.waveform_modes/#sxs.waveforms.waveform_modes.WaveformModes) +encapsulates the modes of the waveform and the corresponding time information, +along with relevant metadata like data type, spin weight, etc., and useful +features like numpy-array-style slicing. + + +%package -n python3-sxs +Summary: Interface to data produced by the Simulating eXtreme Spacetimes collaboration +Provides: python-sxs +BuildRequires: python3-devel +BuildRequires: python3-setuptools +BuildRequires: python3-pip +%description -n python3-sxs +[](https://github.com/sxs-collaboration/sxs/actions) +[](https://sxs.readthedocs.io/en/main/?badge=main) +[](https://pypi.org/project/sxs/) +[](https://anaconda.org/conda-forge/sxs) +[](https://github.com/sxs-collaboration/sxs/blob/main/LICENSE) +[](https://mybinder.org/v2/gh/moble/sxs_notebooks/master) + + +# Simulating eXtreme Spacetimes python package + +The `sxs` python package provides a high-level interface for using data +produced by the SXS collaboration. In particular, the function `sxs.load` can +automatically find, download, and load data, returning objects that provide +common interfaces to the various types of data, without forcing the user to +worry about details like data formats or where to find the data. It can also +automatically select the newest or highest-resolution dataset for a given +simulation, or return a range of versions or resolutions. Currently, the +high-level objects encapsulate + + * Catalog — a listing of all data produced by the SXS collaboration + * Metadata — data describing the simulation parameters + * Horizons — time-series data describing the apparent horizons + * Waveforms — time-series data describing the extrapolated gravitational-wave + modes + + +## Installation + +Because this package is pure python code, installation is very simple. In +particular, with a reasonably modern installation, you can just run a command +like + +```bash +conda install -c conda-forge sxs +``` + +or + +```bash +python -m pip install sxs +``` + +Here, `conda` requires the [conda](https://docs.anaconda.com/anaconda/install/) +installation of python, which is the most recommended approach for scientific +python; the second command assumes that you have an appropriate python +environment set up in some other way. Either of these commands will download +and install the `sxs` package and its most vital requirements. + +If you want to install all the goodies that enable things like jupyter +notebooks with plots and interactive tables, you could run + +```bash +conda install -c conda-forge sxs-ecosystem +``` + +or + +```bash +python -m pip install sxs[ecosystem] +``` + +You will probably also want to set some sensible defaults to automatically +download and cache data: + +```bash +python -c "import sxs; sxs.write_config(download=True, cache=True)" +``` + +This will write a configuration file in the directory returned by +`sxs.sxs_directory("config")`, and downloaded data will be cached in the +directory returned by `sxs.sxs_directory("cache")`. See [that function's +documentation](https://sxs.readthedocs.io/en/main/api/sxs.utilities.sxs_directories/#sxsutilitiessxs_directoriessxs_directory) +for details. + + +## Usage + +An extensive demonstration of this package's capabilities is available +[here](https://mybinder.org/v2/gh/moble/sxs_notebooks/master), in the form of +interactive jupyter notebooks that are actually running this code and some +pre-downloaded data. The following is just a very brief overview of the `sxs` +package's main components. + +There are four important objects to understand in this package: + +```python +import sxs + +catalog = sxs.load("catalog") +metadata = sxs.load("SXS:BBH:0123/Lev/metadata.json") +horizons = sxs.load("SXS:BBH:0123/Lev/Horizons.h5") +waveform = sxs.load("SXS:BBH:0123/Lev/rhOverM", extrapolation_order=2) +``` + +[The `catalog` +object](https://sxs.readthedocs.io/en/main/api/sxs.catalog.catalog/#sxs.catalog.catalog.Catalog) +contains information about every simulation in the catalog, including all +available data files, and information about how to get them. You probably +don't need to actually know about details like where to get the data, but +`catalog` can help you find the simulations you care about. Most importantly, +`catalog.simulations` is a `dict` object, where the keys are names of +simulations (like "SXS:BBH:0123") and the values are the same types as [the +`metadata` +object](https://sxs.readthedocs.io/en/main/api/sxs.metadata.metadata/#sxs.metadata.metadata.Metadata), +which contains metadata about that simulation — things like mass ratio, spins, +etc. This `metadata` reflects the actual output of the simulations, which +leads to some inconsistencies in their formats. A more consistent interface +(though it is biased toward returning NaNs where a human might glean more +information) is provided by `catalog.table`, which returns a +[`pandas`](https://pandas.pydata.org/docs/) `DataFrame` with specific data +types for each column. + +The actual data itself is primarily contained in the next two objects. [The +`horizons` +object](https://sxs.readthedocs.io/en/main/api/sxs.horizons/#sxs.horizons.Horizons) +has three attributes — `horizons.A`, `horizons.B`, and `horizons.C` — typically +representing the original two horizons of the black-hole binary and the common +horizon that forms at merger. In matter simulations, one or more of these may +be `None`. Otherwise, each of these three is a +[`HorizonQuantities`](https://sxs.readthedocs.io/en/main/api/sxs.horizons/#sxs.horizons.HorizonQuantities) +object, containing several timeseries relating to mass, spin, and position. + +Finally, the +[`waveform`](https://sxs.readthedocs.io/en/main/api/sxs.waveforms.waveform_modes/#sxs.waveforms.waveform_modes.WaveformModes) +encapsulates the modes of the waveform and the corresponding time information, +along with relevant metadata like data type, spin weight, etc., and useful +features like numpy-array-style slicing. + + +%package help +Summary: Development documents and examples for sxs +Provides: python3-sxs-doc +%description help +[](https://github.com/sxs-collaboration/sxs/actions) +[](https://sxs.readthedocs.io/en/main/?badge=main) +[](https://pypi.org/project/sxs/) +[](https://anaconda.org/conda-forge/sxs) +[](https://github.com/sxs-collaboration/sxs/blob/main/LICENSE) +[](https://mybinder.org/v2/gh/moble/sxs_notebooks/master) + + +# Simulating eXtreme Spacetimes python package + +The `sxs` python package provides a high-level interface for using data +produced by the SXS collaboration. In particular, the function `sxs.load` can +automatically find, download, and load data, returning objects that provide +common interfaces to the various types of data, without forcing the user to +worry about details like data formats or where to find the data. It can also +automatically select the newest or highest-resolution dataset for a given +simulation, or return a range of versions or resolutions. Currently, the +high-level objects encapsulate + + * Catalog — a listing of all data produced by the SXS collaboration + * Metadata — data describing the simulation parameters + * Horizons — time-series data describing the apparent horizons + * Waveforms — time-series data describing the extrapolated gravitational-wave + modes + + +## Installation + +Because this package is pure python code, installation is very simple. In +particular, with a reasonably modern installation, you can just run a command +like + +```bash +conda install -c conda-forge sxs +``` + +or + +```bash +python -m pip install sxs +``` + +Here, `conda` requires the [conda](https://docs.anaconda.com/anaconda/install/) +installation of python, which is the most recommended approach for scientific +python; the second command assumes that you have an appropriate python +environment set up in some other way. Either of these commands will download +and install the `sxs` package and its most vital requirements. + +If you want to install all the goodies that enable things like jupyter +notebooks with plots and interactive tables, you could run + +```bash +conda install -c conda-forge sxs-ecosystem +``` + +or + +```bash +python -m pip install sxs[ecosystem] +``` + +You will probably also want to set some sensible defaults to automatically +download and cache data: + +```bash +python -c "import sxs; sxs.write_config(download=True, cache=True)" +``` + +This will write a configuration file in the directory returned by +`sxs.sxs_directory("config")`, and downloaded data will be cached in the +directory returned by `sxs.sxs_directory("cache")`. See [that function's +documentation](https://sxs.readthedocs.io/en/main/api/sxs.utilities.sxs_directories/#sxsutilitiessxs_directoriessxs_directory) +for details. + + +## Usage + +An extensive demonstration of this package's capabilities is available +[here](https://mybinder.org/v2/gh/moble/sxs_notebooks/master), in the form of +interactive jupyter notebooks that are actually running this code and some +pre-downloaded data. The following is just a very brief overview of the `sxs` +package's main components. + +There are four important objects to understand in this package: + +```python +import sxs + +catalog = sxs.load("catalog") +metadata = sxs.load("SXS:BBH:0123/Lev/metadata.json") +horizons = sxs.load("SXS:BBH:0123/Lev/Horizons.h5") +waveform = sxs.load("SXS:BBH:0123/Lev/rhOverM", extrapolation_order=2) +``` + +[The `catalog` +object](https://sxs.readthedocs.io/en/main/api/sxs.catalog.catalog/#sxs.catalog.catalog.Catalog) +contains information about every simulation in the catalog, including all +available data files, and information about how to get them. You probably +don't need to actually know about details like where to get the data, but +`catalog` can help you find the simulations you care about. Most importantly, +`catalog.simulations` is a `dict` object, where the keys are names of +simulations (like "SXS:BBH:0123") and the values are the same types as [the +`metadata` +object](https://sxs.readthedocs.io/en/main/api/sxs.metadata.metadata/#sxs.metadata.metadata.Metadata), +which contains metadata about that simulation — things like mass ratio, spins, +etc. This `metadata` reflects the actual output of the simulations, which +leads to some inconsistencies in their formats. A more consistent interface +(though it is biased toward returning NaNs where a human might glean more +information) is provided by `catalog.table`, which returns a +[`pandas`](https://pandas.pydata.org/docs/) `DataFrame` with specific data +types for each column. + +The actual data itself is primarily contained in the next two objects. [The +`horizons` +object](https://sxs.readthedocs.io/en/main/api/sxs.horizons/#sxs.horizons.Horizons) +has three attributes — `horizons.A`, `horizons.B`, and `horizons.C` — typically +representing the original two horizons of the black-hole binary and the common +horizon that forms at merger. In matter simulations, one or more of these may +be `None`. Otherwise, each of these three is a +[`HorizonQuantities`](https://sxs.readthedocs.io/en/main/api/sxs.horizons/#sxs.horizons.HorizonQuantities) +object, containing several timeseries relating to mass, spin, and position. + +Finally, the +[`waveform`](https://sxs.readthedocs.io/en/main/api/sxs.waveforms.waveform_modes/#sxs.waveforms.waveform_modes.WaveformModes) +encapsulates the modes of the waveform and the corresponding time information, +along with relevant metadata like data type, spin weight, etc., and useful +features like numpy-array-style slicing. + + +%prep +%autosetup -n sxs-2022.4.5 + +%build +%py3_build + +%install +%py3_install +install -d -m755 %{buildroot}/%{_pkgdocdir} +if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi +if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi +if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi +if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi +pushd %{buildroot} +if [ -d usr/lib ]; then + find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/lib64 ]; then + find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/bin ]; then + find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst +fi +if [ -d usr/sbin ]; then + find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst +fi +touch doclist.lst +if [ -d usr/share/man ]; then + find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst +fi +popd +mv %{buildroot}/filelist.lst . +mv %{buildroot}/doclist.lst . + +%files -n python3-sxs -f filelist.lst +%dir %{python3_sitelib}/* + +%files help -f doclist.lst +%{_docdir}/* + +%changelog +* Fri May 05 2023 Python_Bot <Python_Bot@openeuler.org> - 2022.4.5-1 +- Package Spec generated @@ -0,0 +1 @@ +d4897963511eaf9e6490c6730e2343de sxs-2022.4.5.tar.gz |