automatic import of python-trisicellopeneuler20.03

3 files changed, 135 insertions, 0 deletions

diff --git a/.gitignore b/.gitignore
index e69de29..fd1b3e1 100644
--- a/.gitignore
+++ b/.gitignore
@@ -0,0 +1 @@
+/trisicell-0.2.1.tar.gz
diff --git a/python-trisicell.spec b/python-trisicell.spec
new file mode 100644
index 0000000..dc7f623
--- /dev/null
+++ b/python-trisicell.spec
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+%global _empty_manifest_terminate_build 0
+Name:		python-trisicell
+Version:	0.2.1
+Release:	1
+Summary:	please add a summary manually as the author left a blank one
+License:	BSD
+URL:		https://github.com/faridrashidi/trisicell
+Source0:	https://mirrors.nju.edu.cn/pypi/web/packages/38/bc/fc01229c47cd5bd5c5e92134b793f8846fb44fe04654a3ee296125d41973/trisicell-0.2.1.tar.gz
+BuildArch:	noarch
+
+Requires:	python3-anndata
+Requires:	python3-apted
+Requires:	python3-biopython
+Requires:	python3-click
+Requires:	python3-cython
+Requires:	python3-cyvcf2
+Requires:	python3-ete3
+Requires:	python3-ipython
+Requires:	python3-joblib
+Requires:	python3-matplotlib
+Requires:	python3-mudata
+Requires:	python3-natsort
+Requires:	python3-networkx
+Requires:	python3-numba
+Requires:	python3-numpy
+Requires:	python3-pandas
+Requires:	python3-pybnb
+Requires:	python3-pydot
+Requires:	python3-sat
+Requires:	python3-pyyaml
+Requires:	python3-scanpy
+Requires:	python3-scikit-learn
+Requires:	python3-scipy
+Requires:	python3-seaborn
+Requires:	python3-termcolor
+Requires:	python3-tqdm
+Requires:	python3-black
+Requires:	python3-pre-commit
+Requires:	python3-isort
+Requires:	python3-pytest-cov
+Requires:	python3-memory-profiler
+Requires:	python3-nbsphinx
+Requires:	python3-pyenchant
+Requires:	python3-pypandoc
+Requires:	python3-requests
+Requires:	python3-sphinx
+Requires:	python3-sphinx-autodoc-annotation
+Requires:	python3-sphinx-autodoc-typehints
+Requires:	python3-sphinx-click
+Requires:	python3-sphinx-paramlinks
+Requires:	python3-sphinx-copybutton
+Requires:	python3-sphinx-gallery
+Requires:	python3-sphinx-last-updated-by-git
+Requires:	python3-sphinx-rtd-theme
+Requires:	python3-sphinxcontrib-bibtex
+Requires:	python3-sphinxcontrib-spelling
+
+%description
+Trisicell (**Tri**\ ple-toolkit for **si**\ ngle-\ **cell** intratumor
+heterogeneity inference), pronounced as "tricycle", is a new computational
+toolkit for scalable intratumor heterogeneity inference and evaluation from
+single-cell RNA, as well as single-cell genome or exome, sequencing data.
+Trisicell utilizes expressed SNVs and Indels to infer evolutionary
+relationships between genomic alterations and the cells that harbor them.
+
+%package -n python3-trisicell
+Summary:	please add a summary manually as the author left a blank one
+Provides:	python-trisicell
+BuildRequires:	python3-devel
+BuildRequires:	python3-setuptools
+BuildRequires:	python3-pip
+%description -n python3-trisicell
+Trisicell (**Tri**\ ple-toolkit for **si**\ ngle-\ **cell** intratumor
+heterogeneity inference), pronounced as "tricycle", is a new computational
+toolkit for scalable intratumor heterogeneity inference and evaluation from
+single-cell RNA, as well as single-cell genome or exome, sequencing data.
+Trisicell utilizes expressed SNVs and Indels to infer evolutionary
+relationships between genomic alterations and the cells that harbor them.
+
+%package help
+Summary:	Development documents and examples for trisicell
+Provides:	python3-trisicell-doc
+%description help
+Trisicell (**Tri**\ ple-toolkit for **si**\ ngle-\ **cell** intratumor
+heterogeneity inference), pronounced as "tricycle", is a new computational
+toolkit for scalable intratumor heterogeneity inference and evaluation from
+single-cell RNA, as well as single-cell genome or exome, sequencing data.
+Trisicell utilizes expressed SNVs and Indels to infer evolutionary
+relationships between genomic alterations and the cells that harbor them.
+
+%prep
+%autosetup -n trisicell-0.2.1
+
+%build
+%py3_build
+
+%install
+%py3_install
+install -d -m755 %{buildroot}/%{_pkgdocdir}
+if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
+if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
+if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
+if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
+pushd %{buildroot}
+if [ -d usr/lib ]; then
+	find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/lib64 ]; then
+	find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/bin ]; then
+	find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/sbin ]; then
+	find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+touch doclist.lst
+if [ -d usr/share/man ]; then
+	find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
+fi
+popd
+mv %{buildroot}/filelist.lst .
+mv %{buildroot}/doclist.lst .
+
+%files -n python3-trisicell -f filelist.lst
+%dir %{python3_sitelib}/*
+
+%files help -f doclist.lst
+%{_docdir}/*
+
+%changelog
+* Fri May 05 2023 Python_Bot <Python_Bot@openeuler.org> - 0.2.1-1
+- Package Spec generated
diff --git a/sources b/sources
new file mode 100644
index 0000000..5e9b418
--- /dev/null
+++ b/sources
@@ -0,0 +1 @@
+ea5eba0b0552240962aad1eb98650609  trisicell-0.2.1.tar.gz