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author | CoprDistGit <infra@openeuler.org> | 2023-06-20 09:18:30 +0000 |
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committer | CoprDistGit <infra@openeuler.org> | 2023-06-20 09:18:30 +0000 |
commit | 5a0ca8fa94718c5d95f1623db77d801db9619f07 (patch) | |
tree | e1448ffe9cfcfd6c8a1de66bc57824c8ea9a96e6 | |
parent | 1d0e7ebc104982aacf526139f1424651e0b927bf (diff) |
automatic import of python-vfb-connectopeneuler20.03
-rw-r--r-- | .gitignore | 1 | ||||
-rw-r--r-- | python-vfb-connect.spec | 189 | ||||
-rw-r--r-- | sources | 1 |
3 files changed, 191 insertions, 0 deletions
@@ -0,0 +1 @@ +/vfb_connect-1.2.10.tar.gz diff --git a/python-vfb-connect.spec b/python-vfb-connect.spec new file mode 100644 index 0000000..bb199ae --- /dev/null +++ b/python-vfb-connect.spec @@ -0,0 +1,189 @@ +%global _empty_manifest_terminate_build 0 +Name: python-vfb-connect +Version: 1.2.10 +Release: 1 +Summary: Wrapper for querying VirtualFlyBrain servers. +License: GNU General Public License v3 (GPLv3) +URL: https://github.com/VirtualFlyBrain/VFB_connect +Source0: https://mirrors.aliyun.com/pypi/web/packages/d5/1d/860e191040954bc19b6ddfb222252d922ec2df1500c18da58bd4b4c19440/vfb_connect-1.2.10.tar.gz +BuildArch: noarch + +Requires: python3-requests +Requires: python3-pandas +Requires: python3-jsonpath-rw + +%description +# VFB_connect [](https://github.com/VirtualFlyBrain/VFB_connect/actions/workflows/test_vfb-connect.yml) [](https://github.com/VirtualFlyBrain/VFB_connect/actions/workflows/publish-to-pypi.yml) [](https://pypi.org/project/vfb-connect/) +[](https://github.com/VirtualFlyBrain/VFB_connect/actions/workflows/test_notebooks.yml) [](https://vfb-connect.readthedocs.io/en/stable/?badge=latest) + +VFB_connect is a Python lib that wraps data/knowledgeBase query endpoints and returns VFB_json. + + +Available on PyPi: + +` pip install vfb_connect ` + + + ## Some examples: + + ```python + +from vfb_connect.cross_server_tools import VfbConnect + +# VFB connect object wraps connections and queries to public VFB servers. + +vc=VfbConnect() + +# Get TermInfo for Types/Classes, DataSets and anatomical individuals. + +vc.neo_query_wrapper.get_type_TermInfo(['FBbt_00003686']) + +vc.neo_query_wrapper.get_DataSet_TermInfo(['Ito02013']) + +vc.neo_query_wrapper.get_anatomical_individual_TermInfo(['VFB_00010001']) + +# Get all terms relevant to a brain region (all parts and all overlapping cells. Query by label supported by default. + +vc.get_terms_by_region('fan-shaped body') + +``` + +TermInfo return values conform to [VFB_json_schema](https://virtualflybrain.github.io/schema_doc.html) + +For more examples see our [Quick Guide Jupyter Notebook](https://github.com/VirtualFlyBrain/VFB_connect/blob/master/snippets/VFB_connect_Quick_Guide.ipynb) + + +%package -n python3-vfb-connect +Summary: Wrapper for querying VirtualFlyBrain servers. +Provides: python-vfb-connect +BuildRequires: python3-devel +BuildRequires: python3-setuptools +BuildRequires: python3-pip +%description -n python3-vfb-connect +# VFB_connect [](https://github.com/VirtualFlyBrain/VFB_connect/actions/workflows/test_vfb-connect.yml) [](https://github.com/VirtualFlyBrain/VFB_connect/actions/workflows/publish-to-pypi.yml) [](https://pypi.org/project/vfb-connect/) +[](https://github.com/VirtualFlyBrain/VFB_connect/actions/workflows/test_notebooks.yml) [](https://vfb-connect.readthedocs.io/en/stable/?badge=latest) + +VFB_connect is a Python lib that wraps data/knowledgeBase query endpoints and returns VFB_json. + + +Available on PyPi: + +` pip install vfb_connect ` + + + ## Some examples: + + ```python + +from vfb_connect.cross_server_tools import VfbConnect + +# VFB connect object wraps connections and queries to public VFB servers. + +vc=VfbConnect() + +# Get TermInfo for Types/Classes, DataSets and anatomical individuals. + +vc.neo_query_wrapper.get_type_TermInfo(['FBbt_00003686']) + +vc.neo_query_wrapper.get_DataSet_TermInfo(['Ito02013']) + +vc.neo_query_wrapper.get_anatomical_individual_TermInfo(['VFB_00010001']) + +# Get all terms relevant to a brain region (all parts and all overlapping cells. Query by label supported by default. + +vc.get_terms_by_region('fan-shaped body') + +``` + +TermInfo return values conform to [VFB_json_schema](https://virtualflybrain.github.io/schema_doc.html) + +For more examples see our [Quick Guide Jupyter Notebook](https://github.com/VirtualFlyBrain/VFB_connect/blob/master/snippets/VFB_connect_Quick_Guide.ipynb) + + +%package help +Summary: Development documents and examples for vfb-connect +Provides: python3-vfb-connect-doc +%description help +# VFB_connect [](https://github.com/VirtualFlyBrain/VFB_connect/actions/workflows/test_vfb-connect.yml) [](https://github.com/VirtualFlyBrain/VFB_connect/actions/workflows/publish-to-pypi.yml) [](https://pypi.org/project/vfb-connect/) +[](https://github.com/VirtualFlyBrain/VFB_connect/actions/workflows/test_notebooks.yml) [](https://vfb-connect.readthedocs.io/en/stable/?badge=latest) + +VFB_connect is a Python lib that wraps data/knowledgeBase query endpoints and returns VFB_json. + + +Available on PyPi: + +` pip install vfb_connect ` + + + ## Some examples: + + ```python + +from vfb_connect.cross_server_tools import VfbConnect + +# VFB connect object wraps connections and queries to public VFB servers. + +vc=VfbConnect() + +# Get TermInfo for Types/Classes, DataSets and anatomical individuals. + +vc.neo_query_wrapper.get_type_TermInfo(['FBbt_00003686']) + +vc.neo_query_wrapper.get_DataSet_TermInfo(['Ito02013']) + +vc.neo_query_wrapper.get_anatomical_individual_TermInfo(['VFB_00010001']) + +# Get all terms relevant to a brain region (all parts and all overlapping cells. Query by label supported by default. + +vc.get_terms_by_region('fan-shaped body') + +``` + +TermInfo return values conform to [VFB_json_schema](https://virtualflybrain.github.io/schema_doc.html) + +For more examples see our [Quick Guide Jupyter Notebook](https://github.com/VirtualFlyBrain/VFB_connect/blob/master/snippets/VFB_connect_Quick_Guide.ipynb) + + +%prep +%autosetup -n vfb_connect-1.2.10 + +%build +%py3_build + +%install +%py3_install +install -d -m755 %{buildroot}/%{_pkgdocdir} +if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi +if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi +if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi +if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi +pushd %{buildroot} +if [ -d usr/lib ]; then + find usr/lib -type f -printf "\"/%h/%f\"\n" >> filelist.lst +fi +if [ -d usr/lib64 ]; then + find usr/lib64 -type f -printf "\"/%h/%f\"\n" >> filelist.lst +fi +if [ -d usr/bin ]; then + find usr/bin -type f -printf "\"/%h/%f\"\n" >> filelist.lst +fi +if [ -d usr/sbin ]; then + find usr/sbin -type f -printf "\"/%h/%f\"\n" >> filelist.lst +fi +touch doclist.lst +if [ -d usr/share/man ]; then + find usr/share/man -type f -printf "\"/%h/%f.gz\"\n" >> doclist.lst +fi +popd +mv %{buildroot}/filelist.lst . +mv %{buildroot}/doclist.lst . + +%files -n python3-vfb-connect -f filelist.lst +%dir %{python3_sitelib}/* + +%files help -f doclist.lst +%{_docdir}/* + +%changelog +* Tue Jun 20 2023 Python_Bot <Python_Bot@openeuler.org> - 1.2.10-1 +- Package Spec generated @@ -0,0 +1 @@ +758afb485501b2175e09727a78274ca0 vfb_connect-1.2.10.tar.gz |