blob: bb199ae9121956d964f47e8c6c42507e39a83a18 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
|
%global _empty_manifest_terminate_build 0
Name: python-vfb-connect
Version: 1.2.10
Release: 1
Summary: Wrapper for querying VirtualFlyBrain servers.
License: GNU General Public License v3 (GPLv3)
URL: https://github.com/VirtualFlyBrain/VFB_connect
Source0: https://mirrors.aliyun.com/pypi/web/packages/d5/1d/860e191040954bc19b6ddfb222252d922ec2df1500c18da58bd4b4c19440/vfb_connect-1.2.10.tar.gz
BuildArch: noarch
Requires: python3-requests
Requires: python3-pandas
Requires: python3-jsonpath-rw
%description
# VFB_connect [](https://github.com/VirtualFlyBrain/VFB_connect/actions/workflows/test_vfb-connect.yml) [](https://github.com/VirtualFlyBrain/VFB_connect/actions/workflows/publish-to-pypi.yml) [](https://pypi.org/project/vfb-connect/)
[](https://github.com/VirtualFlyBrain/VFB_connect/actions/workflows/test_notebooks.yml) [](https://vfb-connect.readthedocs.io/en/stable/?badge=latest)
VFB_connect is a Python lib that wraps data/knowledgeBase query endpoints and returns VFB_json.
Available on PyPi:
` pip install vfb_connect `
## Some examples:
```python
from vfb_connect.cross_server_tools import VfbConnect
# VFB connect object wraps connections and queries to public VFB servers.
vc=VfbConnect()
# Get TermInfo for Types/Classes, DataSets and anatomical individuals.
vc.neo_query_wrapper.get_type_TermInfo(['FBbt_00003686'])
vc.neo_query_wrapper.get_DataSet_TermInfo(['Ito02013'])
vc.neo_query_wrapper.get_anatomical_individual_TermInfo(['VFB_00010001'])
# Get all terms relevant to a brain region (all parts and all overlapping cells. Query by label supported by default.
vc.get_terms_by_region('fan-shaped body')
```
TermInfo return values conform to [VFB_json_schema](https://virtualflybrain.github.io/schema_doc.html)
For more examples see our [Quick Guide Jupyter Notebook](https://github.com/VirtualFlyBrain/VFB_connect/blob/master/snippets/VFB_connect_Quick_Guide.ipynb)
%package -n python3-vfb-connect
Summary: Wrapper for querying VirtualFlyBrain servers.
Provides: python-vfb-connect
BuildRequires: python3-devel
BuildRequires: python3-setuptools
BuildRequires: python3-pip
%description -n python3-vfb-connect
# VFB_connect [](https://github.com/VirtualFlyBrain/VFB_connect/actions/workflows/test_vfb-connect.yml) [](https://github.com/VirtualFlyBrain/VFB_connect/actions/workflows/publish-to-pypi.yml) [](https://pypi.org/project/vfb-connect/)
[](https://github.com/VirtualFlyBrain/VFB_connect/actions/workflows/test_notebooks.yml) [](https://vfb-connect.readthedocs.io/en/stable/?badge=latest)
VFB_connect is a Python lib that wraps data/knowledgeBase query endpoints and returns VFB_json.
Available on PyPi:
` pip install vfb_connect `
## Some examples:
```python
from vfb_connect.cross_server_tools import VfbConnect
# VFB connect object wraps connections and queries to public VFB servers.
vc=VfbConnect()
# Get TermInfo for Types/Classes, DataSets and anatomical individuals.
vc.neo_query_wrapper.get_type_TermInfo(['FBbt_00003686'])
vc.neo_query_wrapper.get_DataSet_TermInfo(['Ito02013'])
vc.neo_query_wrapper.get_anatomical_individual_TermInfo(['VFB_00010001'])
# Get all terms relevant to a brain region (all parts and all overlapping cells. Query by label supported by default.
vc.get_terms_by_region('fan-shaped body')
```
TermInfo return values conform to [VFB_json_schema](https://virtualflybrain.github.io/schema_doc.html)
For more examples see our [Quick Guide Jupyter Notebook](https://github.com/VirtualFlyBrain/VFB_connect/blob/master/snippets/VFB_connect_Quick_Guide.ipynb)
%package help
Summary: Development documents and examples for vfb-connect
Provides: python3-vfb-connect-doc
%description help
# VFB_connect [](https://github.com/VirtualFlyBrain/VFB_connect/actions/workflows/test_vfb-connect.yml) [](https://github.com/VirtualFlyBrain/VFB_connect/actions/workflows/publish-to-pypi.yml) [](https://pypi.org/project/vfb-connect/)
[](https://github.com/VirtualFlyBrain/VFB_connect/actions/workflows/test_notebooks.yml) [](https://vfb-connect.readthedocs.io/en/stable/?badge=latest)
VFB_connect is a Python lib that wraps data/knowledgeBase query endpoints and returns VFB_json.
Available on PyPi:
` pip install vfb_connect `
## Some examples:
```python
from vfb_connect.cross_server_tools import VfbConnect
# VFB connect object wraps connections and queries to public VFB servers.
vc=VfbConnect()
# Get TermInfo for Types/Classes, DataSets and anatomical individuals.
vc.neo_query_wrapper.get_type_TermInfo(['FBbt_00003686'])
vc.neo_query_wrapper.get_DataSet_TermInfo(['Ito02013'])
vc.neo_query_wrapper.get_anatomical_individual_TermInfo(['VFB_00010001'])
# Get all terms relevant to a brain region (all parts and all overlapping cells. Query by label supported by default.
vc.get_terms_by_region('fan-shaped body')
```
TermInfo return values conform to [VFB_json_schema](https://virtualflybrain.github.io/schema_doc.html)
For more examples see our [Quick Guide Jupyter Notebook](https://github.com/VirtualFlyBrain/VFB_connect/blob/master/snippets/VFB_connect_Quick_Guide.ipynb)
%prep
%autosetup -n vfb_connect-1.2.10
%build
%py3_build
%install
%py3_install
install -d -m755 %{buildroot}/%{_pkgdocdir}
if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
pushd %{buildroot}
if [ -d usr/lib ]; then
find usr/lib -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
if [ -d usr/lib64 ]; then
find usr/lib64 -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
if [ -d usr/bin ]; then
find usr/bin -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
if [ -d usr/sbin ]; then
find usr/sbin -type f -printf "\"/%h/%f\"\n" >> filelist.lst
fi
touch doclist.lst
if [ -d usr/share/man ]; then
find usr/share/man -type f -printf "\"/%h/%f.gz\"\n" >> doclist.lst
fi
popd
mv %{buildroot}/filelist.lst .
mv %{buildroot}/doclist.lst .
%files -n python3-vfb-connect -f filelist.lst
%dir %{python3_sitelib}/*
%files help -f doclist.lst
%{_docdir}/*
%changelog
* Tue Jun 20 2023 Python_Bot <Python_Bot@openeuler.org> - 1.2.10-1
- Package Spec generated
|
