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authorCoprDistGit <infra@openeuler.org>2023-05-05 04:22:39 +0000
committerCoprDistGit <infra@openeuler.org>2023-05-05 04:22:39 +0000
commit727af06139cd287d71f9b213ed144740cff5ee10 (patch)
tree82779eb55aa95e463eb47285e150624e7e065aa5
parentb5b9068bb3d8992b48b5c15fa932b32311bce121 (diff)
automatic import of python-biosimulators-test-suiteopeneuler20.03
-rw-r--r--.gitignore1
-rw-r--r--python-biosimulators-test-suite.spec158
-rw-r--r--sources1
3 files changed, 160 insertions, 0 deletions
diff --git a/.gitignore b/.gitignore
index e69de29..5ee5b4b 100644
--- a/.gitignore
+++ b/.gitignore
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+/biosimulators_test_suite-0.1.87.tar.gz
diff --git a/python-biosimulators-test-suite.spec b/python-biosimulators-test-suite.spec
new file mode 100644
index 0000000..012c959
--- /dev/null
+++ b/python-biosimulators-test-suite.spec
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+%global _empty_manifest_terminate_build 0
+Name: python-biosimulators-test-suite
+Version: 0.1.87
+Release: 1
+Summary: Tools for validating that biosimulation tools are consistent with the BioSimulators standards
+License: MIT
+URL: https://github.com/biosimulators/Biosimulators_test_suite
+Source0: https://mirrors.nju.edu.cn/pypi/web/packages/ea/f0/638d34261fd6757ebf4675156bb3813839e5fb9a5b0cee9ac61e2e40a560/biosimulators_test_suite-0.1.87.tar.gz
+BuildArch: noarch
+
+Requires: python3-PyPDF2
+Requires: python3-biosimulators-utils[bngl,cellml,containers,lems,neuroml,sbml,smoldyn]
+Requires: python3-cement
+Requires: python3-docker
+Requires: python3-natsort
+Requires: python3-numpy
+Requires: python3-dateutil
+Requires: python3-pyyaml
+Requires: python3-simplejson
+Requires: python3-termcolor
+Requires: python3-biosimulators-utils[logging]
+Requires: python3-parameterized
+Requires: python3-biosimulators-utils[logging]
+Requires: python3-parameterized
+
+%description
+The BioSimulators test suite is a tool for validating that biosimulation
+software tools implement the `BioSimulators conventions for
+biosimulation
+tools <https://docs.biosimulations.org/concepts/conventions/>`__.
+The test suite is composed of two parts:
+- `A collection of example modeling projects <examples>`__. Each
+ project is represented by a single `COMBINE/OMEX
+ archive <https://combinearchive.org/>`__ that contains one or more
+ simulation experiments described using the `Simulation Experiment
+ Description Markup Language (SED-ML) <https://sed-ml.org>`__ and one
+ or more models described using a format such as the `BioNetGen
+ Language (BNGL) <https://bionetgen.org>`__ or the `Systems Biology
+ Markup Language (SBML) <http://sbml.org>`__.
+- Software for checking that biosimulation tools execute these projects
+ according to the BioSimulators conventions.
+ - Simulation tools support the `BioSimulators standard command-line
+ arguments <https://docs.biosimulations.org/concepts/conventions/simulator-interfaces/>`__.
+ - Simulation tools support the `BioSimulators conventions for Docker
+ images <https://docs.biosimulations.org/concepts/conventions/simulator-images/>`__.
+ - Simulation tools follow the `BioSimulators conventions for
+ executing simulations described by SED-ML files in COMBINE/OMEX
+ archives <https://docs.biosimulations.org/concepts/conventions/simulation-experiments/>`__.
+ - Simulation tools support the `BioSimulators conventions for the
+ outputs of SED-ML files in COMBINE/OMEX
+ archives <https://docs.biosimulations.org/concepts/conventions/simulation-run-reports/>`__.
+
+%package -n python3-biosimulators-test-suite
+Summary: Tools for validating that biosimulation tools are consistent with the BioSimulators standards
+Provides: python-biosimulators-test-suite
+BuildRequires: python3-devel
+BuildRequires: python3-setuptools
+BuildRequires: python3-pip
+%description -n python3-biosimulators-test-suite
+The BioSimulators test suite is a tool for validating that biosimulation
+software tools implement the `BioSimulators conventions for
+biosimulation
+tools <https://docs.biosimulations.org/concepts/conventions/>`__.
+The test suite is composed of two parts:
+- `A collection of example modeling projects <examples>`__. Each
+ project is represented by a single `COMBINE/OMEX
+ archive <https://combinearchive.org/>`__ that contains one or more
+ simulation experiments described using the `Simulation Experiment
+ Description Markup Language (SED-ML) <https://sed-ml.org>`__ and one
+ or more models described using a format such as the `BioNetGen
+ Language (BNGL) <https://bionetgen.org>`__ or the `Systems Biology
+ Markup Language (SBML) <http://sbml.org>`__.
+- Software for checking that biosimulation tools execute these projects
+ according to the BioSimulators conventions.
+ - Simulation tools support the `BioSimulators standard command-line
+ arguments <https://docs.biosimulations.org/concepts/conventions/simulator-interfaces/>`__.
+ - Simulation tools support the `BioSimulators conventions for Docker
+ images <https://docs.biosimulations.org/concepts/conventions/simulator-images/>`__.
+ - Simulation tools follow the `BioSimulators conventions for
+ executing simulations described by SED-ML files in COMBINE/OMEX
+ archives <https://docs.biosimulations.org/concepts/conventions/simulation-experiments/>`__.
+ - Simulation tools support the `BioSimulators conventions for the
+ outputs of SED-ML files in COMBINE/OMEX
+ archives <https://docs.biosimulations.org/concepts/conventions/simulation-run-reports/>`__.
+
+%package help
+Summary: Development documents and examples for biosimulators-test-suite
+Provides: python3-biosimulators-test-suite-doc
+%description help
+The BioSimulators test suite is a tool for validating that biosimulation
+software tools implement the `BioSimulators conventions for
+biosimulation
+tools <https://docs.biosimulations.org/concepts/conventions/>`__.
+The test suite is composed of two parts:
+- `A collection of example modeling projects <examples>`__. Each
+ project is represented by a single `COMBINE/OMEX
+ archive <https://combinearchive.org/>`__ that contains one or more
+ simulation experiments described using the `Simulation Experiment
+ Description Markup Language (SED-ML) <https://sed-ml.org>`__ and one
+ or more models described using a format such as the `BioNetGen
+ Language (BNGL) <https://bionetgen.org>`__ or the `Systems Biology
+ Markup Language (SBML) <http://sbml.org>`__.
+- Software for checking that biosimulation tools execute these projects
+ according to the BioSimulators conventions.
+ - Simulation tools support the `BioSimulators standard command-line
+ arguments <https://docs.biosimulations.org/concepts/conventions/simulator-interfaces/>`__.
+ - Simulation tools support the `BioSimulators conventions for Docker
+ images <https://docs.biosimulations.org/concepts/conventions/simulator-images/>`__.
+ - Simulation tools follow the `BioSimulators conventions for
+ executing simulations described by SED-ML files in COMBINE/OMEX
+ archives <https://docs.biosimulations.org/concepts/conventions/simulation-experiments/>`__.
+ - Simulation tools support the `BioSimulators conventions for the
+ outputs of SED-ML files in COMBINE/OMEX
+ archives <https://docs.biosimulations.org/concepts/conventions/simulation-run-reports/>`__.
+
+%prep
+%autosetup -n biosimulators-test-suite-0.1.87
+
+%build
+%py3_build
+
+%install
+%py3_install
+install -d -m755 %{buildroot}/%{_pkgdocdir}
+if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
+if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
+if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
+if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
+pushd %{buildroot}
+if [ -d usr/lib ]; then
+ find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/lib64 ]; then
+ find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/bin ]; then
+ find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/sbin ]; then
+ find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+touch doclist.lst
+if [ -d usr/share/man ]; then
+ find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
+fi
+popd
+mv %{buildroot}/filelist.lst .
+mv %{buildroot}/doclist.lst .
+
+%files -n python3-biosimulators-test-suite -f filelist.lst
+%dir %{python3_sitelib}/*
+
+%files help -f doclist.lst
+%{_docdir}/*
+
+%changelog
+* Fri May 05 2023 Python_Bot <Python_Bot@openeuler.org> - 0.1.87-1
+- Package Spec generated
diff --git a/sources b/sources
new file mode 100644
index 0000000..b3f80f9
--- /dev/null
+++ b/sources
@@ -0,0 +1 @@
+7ae4845c72d23f6e096e32469962125e biosimulators_test_suite-0.1.87.tar.gz