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authorCoprDistGit <infra@openeuler.org>2023-05-31 05:38:22 +0000
committerCoprDistGit <infra@openeuler.org>2023-05-31 05:38:22 +0000
commit62de275e67bc2e46cf21b5e6a5419ddbe8097baa (patch)
tree89d153c706a8b1790c190165b8429e23992b426a
parent7567894321468cac76c9b5dcb526428ca72258fb (diff)
automatic import of python-immunedb
-rw-r--r--.gitignore1
-rw-r--r--python-immunedb.spec144
-rw-r--r--sources1
3 files changed, 146 insertions, 0 deletions
diff --git a/.gitignore b/.gitignore
index e69de29..b16c782 100644
--- a/.gitignore
+++ b/.gitignore
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+/ImmuneDB-0.29.11.tar.gz
diff --git a/python-immunedb.spec b/python-immunedb.spec
new file mode 100644
index 0000000..461eeb3
--- /dev/null
+++ b/python-immunedb.spec
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+%global _empty_manifest_terminate_build 0
+Name: python-ImmuneDB
+Version: 0.29.11
+Release: 1
+Summary: A system for the analysis and exploration of high-throughput adaptive immune receptor sequencing data
+License: LICENSE.txt
+URL: https://github.com/arosenfeld/immunedb
+Source0: https://mirrors.nju.edu.cn/pypi/web/packages/ba/10/d5732f71fc69de4a6e0464e827a205c2b130e01a7fe4426515c15a0cb49b/ImmuneDB-0.29.11.tar.gz
+BuildArch: noarch
+
+
+%description
+[![Build Status](https://img.shields.io/travis/arosenfeld/immunedb/master.svg)](https://travis-ci.org/arosenfeld/immunedb)
+[![Documentation Status](https://readthedocs.org/projects/immunedb/badge/?version=latest)](https://immunedb.readthedocs.io/en/latest/?badge=latest)
+[![codecov](https://codecov.io/gh/arosenfeld/immunedb/branch/master/graph/badge.svg)](https://codecov.io/gh/arosenfeld/immunedb)
+[![PyPI](https://img.shields.io/pypi/v/immunedb.svg)](https://pypi.python.org/pypi/ImmuneDB)
+[![Docker Pulls](https://img.shields.io/docker/pulls/arosenfeld/immunedb.svg)](https://hub.docker.com/r/arosenfeld/immunedb)
+[![](https://img.shields.io/static/v1?label=AIRR-C%20sw-tools%20v1&message=compliant&color=008AFF&labelColor=000000&style=plastic)](https://docs.airr-community.org/en/stable/swtools/airr_swtools_standard.html)
+ImmuneDB is a Python module that facilitates efficient storage and analysis of
+high-throughput B- and T-cell sequence data.
+# Documentation
+Installation and usage instructions can be found at [immunedb.com](http://immunedb.com)
+# Support
+Basic questions regarding installing and running ImmuneDB can be emailed to
+aaron.rosenfeld@pennmedicine.upenn.edu. Bugs and feature requests should be
+submitted as [Issues](https://github.com/arosenfeld/immunedb/issues). I try to
+respond to both within 2 business days if possible.
+# Citing
+If you use ImmuneDB, please cite the tool as:
+Rosenfeld, A. M., Meng, W., Luning Prak, E. T., Hershberg, U., **ImmuneDB, a
+Novel Tool for the Analysis, Storage, and Dissemination of Immune Repertoire
+Sequencing Data**. Frontiers in Immunology **9** (2018).
+ImmuneDB was originally announced previously in:
+Rosenfeld, A. M., Meng, W., Luning Prak, E. T., Hershberg, U.,
+**ImmuneDB: a system for the analysis and exploration of high-throughput
+adaptive immune receptor sequencing data**, Bioinformatics **33** (2016), no. 2,
+292–293.
+
+%package -n python3-ImmuneDB
+Summary: A system for the analysis and exploration of high-throughput adaptive immune receptor sequencing data
+Provides: python-ImmuneDB
+BuildRequires: python3-devel
+BuildRequires: python3-setuptools
+BuildRequires: python3-pip
+%description -n python3-ImmuneDB
+[![Build Status](https://img.shields.io/travis/arosenfeld/immunedb/master.svg)](https://travis-ci.org/arosenfeld/immunedb)
+[![Documentation Status](https://readthedocs.org/projects/immunedb/badge/?version=latest)](https://immunedb.readthedocs.io/en/latest/?badge=latest)
+[![codecov](https://codecov.io/gh/arosenfeld/immunedb/branch/master/graph/badge.svg)](https://codecov.io/gh/arosenfeld/immunedb)
+[![PyPI](https://img.shields.io/pypi/v/immunedb.svg)](https://pypi.python.org/pypi/ImmuneDB)
+[![Docker Pulls](https://img.shields.io/docker/pulls/arosenfeld/immunedb.svg)](https://hub.docker.com/r/arosenfeld/immunedb)
+[![](https://img.shields.io/static/v1?label=AIRR-C%20sw-tools%20v1&message=compliant&color=008AFF&labelColor=000000&style=plastic)](https://docs.airr-community.org/en/stable/swtools/airr_swtools_standard.html)
+ImmuneDB is a Python module that facilitates efficient storage and analysis of
+high-throughput B- and T-cell sequence data.
+# Documentation
+Installation and usage instructions can be found at [immunedb.com](http://immunedb.com)
+# Support
+Basic questions regarding installing and running ImmuneDB can be emailed to
+aaron.rosenfeld@pennmedicine.upenn.edu. Bugs and feature requests should be
+submitted as [Issues](https://github.com/arosenfeld/immunedb/issues). I try to
+respond to both within 2 business days if possible.
+# Citing
+If you use ImmuneDB, please cite the tool as:
+Rosenfeld, A. M., Meng, W., Luning Prak, E. T., Hershberg, U., **ImmuneDB, a
+Novel Tool for the Analysis, Storage, and Dissemination of Immune Repertoire
+Sequencing Data**. Frontiers in Immunology **9** (2018).
+ImmuneDB was originally announced previously in:
+Rosenfeld, A. M., Meng, W., Luning Prak, E. T., Hershberg, U.,
+**ImmuneDB: a system for the analysis and exploration of high-throughput
+adaptive immune receptor sequencing data**, Bioinformatics **33** (2016), no. 2,
+292–293.
+
+%package help
+Summary: Development documents and examples for ImmuneDB
+Provides: python3-ImmuneDB-doc
+%description help
+[![Build Status](https://img.shields.io/travis/arosenfeld/immunedb/master.svg)](https://travis-ci.org/arosenfeld/immunedb)
+[![Documentation Status](https://readthedocs.org/projects/immunedb/badge/?version=latest)](https://immunedb.readthedocs.io/en/latest/?badge=latest)
+[![codecov](https://codecov.io/gh/arosenfeld/immunedb/branch/master/graph/badge.svg)](https://codecov.io/gh/arosenfeld/immunedb)
+[![PyPI](https://img.shields.io/pypi/v/immunedb.svg)](https://pypi.python.org/pypi/ImmuneDB)
+[![Docker Pulls](https://img.shields.io/docker/pulls/arosenfeld/immunedb.svg)](https://hub.docker.com/r/arosenfeld/immunedb)
+[![](https://img.shields.io/static/v1?label=AIRR-C%20sw-tools%20v1&message=compliant&color=008AFF&labelColor=000000&style=plastic)](https://docs.airr-community.org/en/stable/swtools/airr_swtools_standard.html)
+ImmuneDB is a Python module that facilitates efficient storage and analysis of
+high-throughput B- and T-cell sequence data.
+# Documentation
+Installation and usage instructions can be found at [immunedb.com](http://immunedb.com)
+# Support
+Basic questions regarding installing and running ImmuneDB can be emailed to
+aaron.rosenfeld@pennmedicine.upenn.edu. Bugs and feature requests should be
+submitted as [Issues](https://github.com/arosenfeld/immunedb/issues). I try to
+respond to both within 2 business days if possible.
+# Citing
+If you use ImmuneDB, please cite the tool as:
+Rosenfeld, A. M., Meng, W., Luning Prak, E. T., Hershberg, U., **ImmuneDB, a
+Novel Tool for the Analysis, Storage, and Dissemination of Immune Repertoire
+Sequencing Data**. Frontiers in Immunology **9** (2018).
+ImmuneDB was originally announced previously in:
+Rosenfeld, A. M., Meng, W., Luning Prak, E. T., Hershberg, U.,
+**ImmuneDB: a system for the analysis and exploration of high-throughput
+adaptive immune receptor sequencing data**, Bioinformatics **33** (2016), no. 2,
+292–293.
+
+%prep
+%autosetup -n ImmuneDB-0.29.11
+
+%build
+%py3_build
+
+%install
+%py3_install
+install -d -m755 %{buildroot}/%{_pkgdocdir}
+if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
+if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
+if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
+if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
+pushd %{buildroot}
+if [ -d usr/lib ]; then
+ find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/lib64 ]; then
+ find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/bin ]; then
+ find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/sbin ]; then
+ find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+touch doclist.lst
+if [ -d usr/share/man ]; then
+ find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
+fi
+popd
+mv %{buildroot}/filelist.lst .
+mv %{buildroot}/doclist.lst .
+
+%files -n python3-ImmuneDB -f filelist.lst
+%dir %{python3_sitelib}/*
+
+%files help -f doclist.lst
+%{_docdir}/*
+
+%changelog
+* Wed May 31 2023 Python_Bot <Python_Bot@openeuler.org> - 0.29.11-1
+- Package Spec generated
diff --git a/sources b/sources
new file mode 100644
index 0000000..0d49a66
--- /dev/null
+++ b/sources
@@ -0,0 +1 @@
+3162aa78228b6a9b6d960a17a859d5a2 ImmuneDB-0.29.11.tar.gz