automatic import of python-rust

1 files changed, 103 insertions, 0 deletions

diff --git a/python-rust.spec b/python-rust.spec
new file mode 100644
index 0000000..5ab3255
--- /dev/null
+++ b/python-rust.spec
@@ -0,0 +1,103 @@
+%global _empty_manifest_terminate_build 0
+Name:		python-RUST
+Version:	0.1.1
+Release:	1
+Summary:	Ribo-Seq Unit Step Transformation
+License:	GPL
+URL:		http://ribogalaxy.ucc.ie
+Source0:	https://mirrors.nju.edu.cn/pypi/web/packages/c3/ff/1ffe5c38505fd5226e344aaf91fd43dc38648ccf79ae7096ea0fa4f7f815/RUST-0.1.1.tar.gz
+BuildArch:	noarch
+
+Requires:	python3-biopython
+Requires:	python3-matplotlib
+Requires:	python3-mock
+Requires:	python3-pysam
+
+%description
+This tool is designed for ribo-seq data and produces a metafootprint profile
+that reveals the influence of mRNA features such as codons/amino acids on
+the relative read density in the sample across the entire ribosome and nascent
+peptide region. The Kullback-Leibler divergence across these sites is also provided.
+An online version is available on `RiboGalaxy <http://ribogalaxy.ucc.ie>`_.
+Author: Patrick O'Connor
+**Citation**
+Surveying the relative impact of mRNA features on local ribosome profiling read density in 28 datasets.
+Patrick O'Connor, Dmitry Andreev, Pavel Baranov
+bioRxiv doi: http://dx.doi.org/10.1101/018762
+
+%package -n python3-RUST
+Summary:	Ribo-Seq Unit Step Transformation
+Provides:	python-RUST
+BuildRequires:	python3-devel
+BuildRequires:	python3-setuptools
+BuildRequires:	python3-pip
+%description -n python3-RUST
+This tool is designed for ribo-seq data and produces a metafootprint profile
+that reveals the influence of mRNA features such as codons/amino acids on
+the relative read density in the sample across the entire ribosome and nascent
+peptide region. The Kullback-Leibler divergence across these sites is also provided.
+An online version is available on `RiboGalaxy <http://ribogalaxy.ucc.ie>`_.
+Author: Patrick O'Connor
+**Citation**
+Surveying the relative impact of mRNA features on local ribosome profiling read density in 28 datasets.
+Patrick O'Connor, Dmitry Andreev, Pavel Baranov
+bioRxiv doi: http://dx.doi.org/10.1101/018762
+
+%package help
+Summary:	Development documents and examples for RUST
+Provides:	python3-RUST-doc
+%description help
+This tool is designed for ribo-seq data and produces a metafootprint profile
+that reveals the influence of mRNA features such as codons/amino acids on
+the relative read density in the sample across the entire ribosome and nascent
+peptide region. The Kullback-Leibler divergence across these sites is also provided.
+An online version is available on `RiboGalaxy <http://ribogalaxy.ucc.ie>`_.
+Author: Patrick O'Connor
+**Citation**
+Surveying the relative impact of mRNA features on local ribosome profiling read density in 28 datasets.
+Patrick O'Connor, Dmitry Andreev, Pavel Baranov
+bioRxiv doi: http://dx.doi.org/10.1101/018762
+
+%prep
+%autosetup -n RUST-0.1.1
+
+%build
+%py3_build
+
+%install
+%py3_install
+install -d -m755 %{buildroot}/%{_pkgdocdir}
+if [ -d doc ]; then cp -arf doc %{buildroot}/%{_pkgdocdir}; fi
+if [ -d docs ]; then cp -arf docs %{buildroot}/%{_pkgdocdir}; fi
+if [ -d example ]; then cp -arf example %{buildroot}/%{_pkgdocdir}; fi
+if [ -d examples ]; then cp -arf examples %{buildroot}/%{_pkgdocdir}; fi
+pushd %{buildroot}
+if [ -d usr/lib ]; then
+	find usr/lib -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/lib64 ]; then
+	find usr/lib64 -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/bin ]; then
+	find usr/bin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+if [ -d usr/sbin ]; then
+	find usr/sbin -type f -printf "/%h/%f\n" >> filelist.lst
+fi
+touch doclist.lst
+if [ -d usr/share/man ]; then
+	find usr/share/man -type f -printf "/%h/%f.gz\n" >> doclist.lst
+fi
+popd
+mv %{buildroot}/filelist.lst .
+mv %{buildroot}/doclist.lst .
+
+%files -n python3-RUST -f filelist.lst
+%dir %{python3_sitelib}/*
+
+%files help -f doclist.lst
+%{_docdir}/*
+
+%changelog
+* Tue Apr 11 2023 Python_Bot <Python_Bot@openeuler.org> - 0.1.1-1
+- Package Spec generated